BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025F12LP1|AL428427
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1798 0.0
>3x_Contig1555
Length = 10828
Score = 1798 bits (907), Expect = 0.0
Identities = 907/907 (100%)
Strand = Plus / Plus
Query: 1 gatccaaacaatccaatagacagctagataaatgaccacaaacaatagggaaaaagcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5666 gatccaaacaatccaatagacagctagataaatgaccacaaacaatagggaaaaagcctt 5725
Query: 61 aaactttaacccagttctgaaaggaaatggaagctacaatgcacaaagacaaggatgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5726 aaactttaacccagttctgaaaggaaatggaagctacaatgcacaaagacaaggatgtta 5785
Query: 121 acagtatcgattagaacctgtatcataacttcaattggaatgtcatttcgtaattcttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5786 acagtatcgattagaacctgtatcataacttcaattggaatgtcatttcgtaattcttta 5845
Query: 181 acgtttttccatgttcaaaaatgcatgaaaaaaaaaaaaaattgtttggtgtagacagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5846 acgtttttccatgttcaaaaatgcatgaaaaaaaaaaaaaattgtttggtgtagacagaa 5905
Query: 241 ccatgtccttttgccatgcagagatgagaagatcacatagtagggcaacacggtttctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5906 ccatgtccttttgccatgcagagatgagaagatcacatagtagggcaacacggtttctag 5965
Query: 301 cacagcgttttgtagagcttataggataatgtcggattcattgaaatagggtaacagacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5966 cacagcgttttgtagagcttataggataatgtcggattcattgaaatagggtaacagacg 6025
Query: 361 gtcaccacttgcacattttgttgattgatgtttaaacgtgctttctataccaccatggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6026 gtcaccacttgcacattttgttgattgatgtttaaacgtgctttctataccaccatggaa 6085
Query: 421 cgataagggcaaacttgtagagataacgacagaaccgaaagtctgttgtacgagtctaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6086 cgataagggcaaacttgtagagataacgacagaaccgaaagtctgttgtacgagtctaat 6145
Query: 481 tgatctgttgagcaacttggcgtcgaatttggggtccatggataagtgcgacaaattatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6146 tgatctgttgagcaacttggcgtcgaatttggggtccatggataagtgcgacaaattatc 6205
Query: 541 aatgaggacccatgccaactgcttcgatgtagacgtttccgaattctgcggttggcatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6206 aatgaggacccatgccaactgcttcgatgtagacgtttccgaattctgcggttggcatct 6265
Query: 601 agacaatgcggtcacgggatctgtacataattgagacataaattgaataaaggaatcgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6266 agacaatgcggtcacgggatctgtacataattgagacataaattgaataaaggaatcgaa 6325
Query: 661 ctgaagcatggaaagattagtctgttggaattccgggtatgtttcgagcaagtcattgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6326 ctgaagcatggaaagattagtctgttggaattccgggtatgtttcgagcaagtcattgtc 6385
Query: 721 gttgtggtcgttccggggcatcgaagaaatgttcaagattagtccgttcccctcacattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6386 gttgtggtcgttccggggcatcgaagaaatgttcaagattagtccgttcccctcacattg 6445
Query: 781 ttcgcgcactgtgttcactatggttcttgttttaccgtttcctcgcagagattcctgtac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6446 ttcgcgcactgtgttcactatggttcttgttttaccgtttcctcgcagagattcctgtac 6505
Query: 841 gacgtgaatcctggtacatttcttaccgttgacttcgcatgtatactggtatggacttgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6506 gacgtgaatcctggtacatttcttaccgttgacttcgcatgtatactggtatggacttgt 6565
Query: 901 aaattgg 907
|||||||
Sbjct: 6566 aaattgg 6572
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,129
Number of Sequences: 1807
Number of extensions: 14129
Number of successful extensions: 369
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)